fix(graph): 改进图数据库查询逻辑和错误处理

修复图数据库查询时的错误处理,添加完整的traceback信息
重构查询逻辑,分离向量查询和模糊查询方法
更新README文档说明知识图谱的限制和使用方法
确保查询只针对带有Entity标签的节点
添加数据库状态检查断言
This commit is contained in:
Wenjie Zhang 2025-07-29 16:30:47 +08:00
parent b4439996fa
commit 007e6aeb1f
3 changed files with 73 additions and 58 deletions

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@ -153,19 +153,23 @@ custom-provider-name-here:
### 知识图谱
在 v0.2 版本中,项目支持了基于 [LightRAG](https://github.com/HKUDS/LightRAG) 的知识图谱构建方法。需要在知识库中创建一个基于 LightRAG 的知识库,然后上传文档。构建的知识图谱会自动导入到 Neo4j 中,并使用不同的 label 做区分。
在 v0.2 版本中,项目支持了基于 [LightRAG](https://github.com/HKUDS/LightRAG) 的知识图谱构建方法。需要在知识库中创建一个基于 LightRAG 的知识库,然后上传文档。构建的知识图谱会自动导入到 Neo4j 中,并使用不同的 label 做区分。需要说明的是,基于 LightRAG 的知识库,可以在知识库详情中可视化,但是不能在侧边栏的图谱中检索,知识图谱检索工具也不支持基于 LightRAG 的知识库进行检索。基于 LightRAG 方法构建的图谱的查询,需要使用对应的知识库作为查询工具。
|知识库可视化|Neo4J管理端|
|--|--|
|![知识库可视化](./docs/images/lightrag_kb.png)|![Neo4J管理端](./docs/images/neo4j_browser.png)|
除此之外,也支持将已有的知识图谱按照下面的格式导入 Neo4j 中,或者通过修改 `docker-compose.yml` 中的 `NEO4J_URI` 配置来接入已有的 Neo4j 实例。默认账户密码是`neo4j` / `0123456789`
除此之外,也支持将已有的知识图谱按照下面的格式导入 Neo4j 中,上传后,节点会自动添加 `Upload`、`Entity` 标签,关系会自动添加 `Relation` 标签。可以通过 `name` 属性访问实体的名称,使用 `type` 属性访问边的名称。默认账户密码是`neo4j` / `0123456789`
**数据格式**:支持 JSONL 格式导入
```jsonl
{"h": "北京", "t": "中国", "r": "首都"}
{"h": "上海", "t": "中国", "r": "直辖市"}
```
此外,也可以通过修改 `docker-compose.yml` 中的 `NEO4J_URI` 配置来接入已有的 Neo4j 实例,但是最好确保每个节点都有 Entity 标签,否则会影响到图的检索与构建。
## 🔧 高级配置
### OCR 服务(可选)

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@ -223,7 +223,7 @@ async def get_neo4j_node(
}
except Exception as e:
logger.error(f"查询图节点失败: {e}")
logger.error(f"查询图节点失败: {e}\n{traceback.format_exc()}")
raise HTTPException(status_code=500, detail=f"查询图节点失败: {str(e)}")
# =============================================================================

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@ -53,14 +53,15 @@ class GraphDatabase:
def is_running(self):
"""检查图数据库是否正在运行"""
return self.status == "open"
return self.status == "open" or self.status == "processing"
def get_sample_nodes(self, kgdb_name='neo4j', num=50):
"""获取指定数据库的 num 个节点信息"""
assert self.driver is not None, "Database is not connected"
self.use_database(kgdb_name)
def query(tx, num):
result = tx.run("MATCH (n)-[r]->(m) RETURN n, r, m LIMIT $num", num=int(num))
"""Note: 这里只查询带有 Entity 标签的节点"""
result = tx.run("MATCH (n:Entity)-[r]->(m:Entity) RETURN n, r, m LIMIT $num", num=int(num))
return result.values()
with self.driver.session() as session:
@ -97,8 +98,8 @@ class GraphDatabase:
t = triple['t']
r = triple['r']
query = (
"MERGE (a:Entity {name: $h}) "
"MERGE (b:Entity {name: $t}) "
"MERGE (a:Entity:Upload {name: $h}) "
"MERGE (b:Entity:Upload {name: $t}) "
"MERGE (a)-[:" + r.replace(" ", "_") + "]->(b)"
)
tx.run(query, h=h, t=t)
@ -122,8 +123,8 @@ class GraphDatabase:
"""添加一个三元组"""
for entry in data:
tx.run("""
MERGE (h:Entity {name: $h})
MERGE (t:Entity {name: $t})
MERGE (h:Entity:Upload {name: $h})
MERGE (t:Entity:Upload {name: $t})
MERGE (h)-[r:RELATION {type: $r}]->(t)
""", h=entry['h'], t=entry['t'], r=entry['r'])
@ -167,10 +168,11 @@ class GraphDatabase:
""", name=entity_name, embedding=embedding)
# 判断模型名称是否匹配
cur_embed_info = config.embed_model_names[config.embed_model]
self.embed_model_name = self.embed_model_name or cur_embed_info.get('name')
assert self.embed_model_name == cur_embed_info.get('name') or self.embed_model_name is None, \
f"embed_model_name={self.embed_model_name}, {cur_embed_info.get('name')=}"
self.embed_model_name = self.embed_model_name or config.embed_model
cur_embed_info = config.embed_model_names.get(self.embed_model_name)
logger.warning(f"embed_model_name={self.embed_model_name}, {cur_embed_info=}")
assert self.embed_model_name == config.embed_model or self.embed_model_name is None, \
f"embed_model_name={self.embed_model_name}, {config.embed_model=}"
with self.driver.session() as session:
logger.info(f"Adding entity to {kgdb_name}")
@ -267,12 +269,48 @@ class GraphDatabase:
def query_node(self, entity_name, threshold=0.9, kgdb_name='neo4j', hops=2, max_entities=5, **kwargs):
"""知识图谱查询节点的入口:"""
assert self.driver is not None, "Database is not connected"
# TODO 添加判断节点数量为 0 停止检索
# 判断是否启动
if not self.is_running():
raise Exception("图数据库未启动")
assert self.is_running(), "图数据库未启动"
self.use_database(kgdb_name)
# 使用向量索引进行查询
results_sim = self._query_with_vector_sim(entity_name, kgdb_name, hops, threshold)
results_fuzzy = self._query_with_fuzzy_match(entity_name, kgdb_name, hops)
results = results_sim + results_fuzzy
qualified_entities = [result[0] for result in results][:max_entities]
logger.debug(f"Graph Query Entities: {entity_name}, {qualified_entities=}")
# 对每个合格的实体进行查询
all_query_results = []
for entity in qualified_entities:
query_result = self._query_specific_entity(entity_name=entity, hops=hops, kgdb_name=kgdb_name)
all_query_results.extend(query_result)
return all_query_results
def _query_with_fuzzy_match(self, keyword, kgdb_name='neo4j', hops = 2):
"""模糊查询"""
assert self.driver is not None, "Database is not connected"
self.use_database(kgdb_name)
def query_fuzzy_match(tx, keyword, hops):
result = tx.run("""
MATCH (n:Entity)
WHERE n.name CONTAINS $keyword
RETURN DISTINCT n.name AS name
""", keyword=keyword)
values = result.values()
logger.debug(f"Fuzzy Query Results: {values}")
return values
with self.driver.session() as session:
return session.execute_read(query_fuzzy_match, keyword, hops)
def _query_with_vector_sim(self, keyword, kgdb_name='neo4j', hops = 2, threshold=0.9):
"""向量查询"""
assert self.driver is not None, "Database is not connected"
self.use_database(kgdb_name)
def _index_exists(tx, index_name):
"""检查索引是否存在"""
result = tx.run("SHOW INDEXES")
@ -281,7 +319,7 @@ class GraphDatabase:
return True
return False
def query(tx, text):
def query_by_vector(tx, text, threshold):
# 首先检查索引是否存在
if not _index_exists(tx, "entityEmbeddings"):
raise Exception("向量索引不存在,请先创建索引")
@ -292,30 +330,15 @@ class GraphDatabase:
YIELD node AS similarEntity, score
RETURN similarEntity.name AS name, score
""", embedding=embedding)
return result.values()
return [r for r in result if r["score"] > threshold]
try:
with self.driver.session() as session:
results = session.execute_read(query, entity_name)
except Exception as e:
if "向量索引不存在" in str(e):
logger.error(f"向量索引不存在,请先创建索引: {e}, {traceback.format_exc()}")
return []
raise e
with self.driver.session() as session:
results = session.execute_read(query_by_vector, keyword, threshold=threshold)
results = clean_triples_embedding(results)
return results
# 筛选出分数高于阈值的实体
qualified_entities = [result[0] for result in results[:max_entities] if result[1] > threshold]
logger.debug(f"Graph Query Entities: {entity_name}, {qualified_entities=}")
# 对每个合格的实体进行查询
all_query_results = []
for entity in qualified_entities:
query_result = self.query_specific_entity(entity_name=entity, hops=hops, kgdb_name=kgdb_name)
all_query_results.extend(query_result)
return all_query_results
def query_specific_entity(self, entity_name, kgdb_name='neo4j', hops=2, limit=100):
def _query_specific_entity(self, entity_name, kgdb_name='neo4j', hops=2, limit=100):
"""查询指定实体三元组信息(无向关系)"""
assert self.driver is not None, "Database is not connected"
if not entity_name:
@ -355,6 +378,7 @@ class GraphDatabase:
def query_all_nodes_and_relationships(self, kgdb_name='neo4j', hops = 2):
"""查询图数据库中所有三元组信息 NEVER USE"""
raise Exception("NEVER USE")
assert self.driver is not None, "Database is not connected"
self.use_database(kgdb_name)
def query(tx, hops):
@ -371,6 +395,7 @@ class GraphDatabase:
def query_by_relationship_type(self, relationship_type, kgdb_name='neo4j', hops = 2):
"""查询指定关系三元组信息 NEVER USE"""
raise Exception("NEVER USE")
assert self.driver is not None, "Database is not connected"
self.use_database(kgdb_name)
def query(tx, relationship_type, hops):
@ -385,26 +410,9 @@ class GraphDatabase:
with self.driver.session() as session:
return session.execute_read(query, relationship_type, hops)
def query_entity_like(self, keyword, kgdb_name='neo4j', hops = 2):
"""模糊查询 NEVER USE"""
assert self.driver is not None, "Database is not connected"
self.use_database(kgdb_name)
def query(tx, keyword, hops):
result = tx.run(f"""
MATCH (n:Entity)
WHERE n.name CONTAINS $keyword
MATCH (n)-[r*1..{hops}]->(m)
RETURN n AS n, r, m AS m
""", keyword=keyword)
values = result.values()
values = clean_triples_embedding(values)
return values
with self.driver.session() as session:
return session.execute_read(query, keyword, hops)
def query_node_info(self, node_name, kgdb_name='neo4j', hops = 2):
"""查询指定节点的详细信息返回信息 NEVER USE"""
raise Exception("NEVER USE")
assert self.driver is not None, "Database is not connected"
self.use_database(kgdb_name) # 切换到指定数据库
def query(tx, node_name, hops):
@ -465,7 +473,7 @@ class GraphDatabase:
}
try:
if self.status == "open" and self.driver and self.is_running():
if self.is_running():
# 获取数据库信息
with self.driver.session() as session:
graph_info = session.execute_read(query)
@ -474,6 +482,9 @@ class GraphDatabase:
from datetime import datetime
graph_info["last_updated"] = datetime.now().isoformat()
return graph_info
else:
logger.warning(f"图数据库未连接或未运行:{self.status=}")
return None
except Exception as e:
logger.error(f"获取图数据库信息失败:{e}, {traceback.format_exc()}")